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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805172.1_cds_XP_016492473.1_8267
CDS Infomation

[gene=LOC107811967] [db_xref=GeneID:107811967] [protein=probable mitochondrial intermediate peptidase, mitochondrial isoform X3] [protein_id=XP_016492473.1] [location=complement(join(19715..19740,20028..20193,20308..20443,20744..20811,20906..21028,21759..21875,22331..22486,24270..24395,24491..24610,25503..25598,26318..26540,27558..27612,27695..27830,31291..31345,31446..31498,31618..31699,31858..32024))] [gbkey=CDS]
Sequence

ATGCACGCTCTGATGCGCCAATCCGCCGCTCATGTACGAGCCAATTCCCACTTCATTCAC
ATTTCAACATCTAAAGCTCCGTCAATCAAAGAGACGGGCCTCTACGGCTATAATCATTTG
AAAACTCCTAAAGGCTTTCAACGATTCGTCGACGATGCTATTGAAAGGTCAGAAGAACTT
GTGAACTATATAGCTGGCATGCCTTCATCTCCTGAAATTATCCGAGCAATGGATGAGATT
TCTGATACTGTGTGCTCAGTAATTGATTCAGCTGAATTATGCAGACATACTCATCCAGAC
AGGGAGTTTGTTGACGAGGCAAGCAAGGCGGGCTTACGAATAAATGAGTTTTTACATTAC
CTTAATACAAACCATAGTATATACAAGGCAGTGATAAAAGCAGAAAAAGATAGCTCACTC
ACTCATGAAGCTCAGAGGGCAGCCCGCTTTCTACGAATGGACTTGGAAAAGGGGGGAATC
CATCTTTGCCCTGAAAAGCTTGATCGAGCTAATGAGCTATCCATTGACATTATTCAGTTG
TGTAGAGAGTATAATAAAAATATTATTACTGACCCTGGCCATGTGGATATATTTCCAGCC
TCTAAGATCCCTAAGAAAATGCACCATTTTGTCAGCCCTATCTATCGTAACATACCAGGT
GCATCTAAGGAATCTCTGGGGTCAAGAGATAACATAAAAGAAAAAGGATTCCGCATAGCA
ACTGAACCAAGTACTCTGCAAGGCCTTCTTCAATGTTTACCAGATGCTGGGGTCAGGAAG
ATGGCATATGTCCAAGGAAATTCTGTTCCACATGCAAACCTTGAGGTTCTTGATAAGCTT
ATCGCAACAAGACATGAGTTTGCTCAGCTTATGGGTTATAAATCTTATGCTGAATTTTCT
CTACATTCTACTATGGCTGCATCTCCTGAAGTGGTCTTATCCTTTTTGCTTGAAATGAGC
AAAGTGGTCAGACCAAAGGCTGATCAAGAGTTTGAGGCAATTCGGGATTTCAAGAGAGAG
AAAAGTGGTGAGCCTAGTGGAGAGTTGGAGCCATGGGATGAGGCATACTTCACATGGTTG
ATGAAGTCTGCAACATACAAGTTGGACTCCTCGATTATAGCATCATATTTTCCTTTACCA
CAGTGTATTGAGGGTTTGAAAATTTTGGTTGAGTCACTCTTTGGTGTGACTTTTCACAGA
GTACCCCTTGCACCTGGTGAATCATGGCATCCGGATGTGTTAAAGATAGTGCTACATCAT
CCGACTGAGGGAGACCTGGGGTACTTATACCTTGATTTAAAGTCAAGAAAAGGTAAACAT
CCCATTTGTGCTCATTTCGCTATCCGAGGAGGGCGTCGTGTTTCCGAGACAGAATACCAA
CTTCCTGTTGTAGCACTGGTTTGCAATTTCTCTGGGTCGAGTTTGGCTCCTGTGAGGCTT
AACCACTTTGAAGTAGAAACACTTTTCCATGAGTTTGGGCATGCTCTCCATTCATTGCTC
TCAAGAACGGAATATCAACACTTTCCGGGTACAAGAGTAGTTCTTGATTTTGCTGAAACG
CCTTCAAACCTATTTGAGTCCTATGCATGGGATTATCGGGTGTTAAAGACATTTGCTAAG
CACTACTCAACTGGTGATGTCATTCCCAAAGAACTCGTGGAATCAATGGTGGGAGCTAAG
AAGATGTTTGCTGCAACTGAATTGCAACGCCAGATCTTCTACGCATTAGTTGACCAAACA
CTTTTCGGAGAGCAGACATCCACAGGGAGAGATACAATGGCGATTGTTGCAGATTTGAAA
AGACAACATACAAGTTGGACACATGTGGAAGGAACACATTGGCATACCCGATTCAGTCAC
CTTACAAACTATGGTGCAGAACTCGAAGGTAGTGGGAGACAGTAA

Peptide Sequence

PEP ID

XP_016492473.1
PEP Infomation

PREDICTED: probable mitochondrial intermediate peptidase, mitochondrial isoform X3 [Nicotiana tabacum]
Sequence

MHALMRQSAAHVRANSHFIHISTSKAPSIKETGLYGYNHLKTPKGFQRFVDDAIERSEEL
VNYIAGMPSSPEIIRAMDEISDTVCSVIDSAELCRHTHPDREFVDEASKAGLRINEFLHY
LNTNHSIYKAVIKAEKDSSLTHEAQRAARFLRMDLEKGGIHLCPEKLDRANELSIDIIQL
CREYNKNIITDPGHVDIFPASKIPKKMHHFVSPIYRNIPGASKESLGSRDNIKEKGFRIA
TEPSTLQGLLQCLPDAGVRKMAYVQGNSVPHANLEVLDKLIATRHEFAQLMGYKSYAEFS
LHSTMAASPEVVLSFLLEMSKVVRPKADQEFEAIRDFKREKSGEPSGELEPWDEAYFTWL
MKSATYKLDSSIIASYFPLPQCIEGLKILVESLFGVTFHRVPLAPGESWHPDVLKIVLHH
PTEGDLGYLYLDLKSRKGKHPICAHFAIRGGRRVSETEYQLPVVALVCNFSGSSLAPVRL
NHFEVETLFHEFGHALHSLLSRTEYQHFPGTRVVLDFAETPSNLFESYAWDYRVLKTFAK
HYSTGDVIPKELVESMVGAKKMFAATELQRQIFYALVDQTLFGEQTSTGRDTMAIVADLK
RQHTSWTHVEGTHWHTRFSHLTNYGAELEGSGRQ

Transcript Sequence

Gene sequence data has not been registered.